Ligand clusters for UniProt code P00690

Ligand clusters for P00690: Pancreatic alpha-amylase OS=Sus scrofa GN=AMY2 PE=1 SV=3

		Top 6 (of 20) ligand clusters Cluster 1. 13 ligand types 15 ligands Cluster 2. 6 ligand types 6 ligands Cluster 3. 5 ligand types 6 ligands Cluster 4. 2 ligand types 2 ligands Cluster 5. 3 ligand types 4 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 1bvnP

Structures

PDB		Schematic diagram
1bvnP
3l2lA
4x0nA
3l2mA
1kxqA
		more ...

Cluster 1 contains 13 ligand types

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Ligand		Description
		1. Ligand: MLR × 1 Maltotriose PDB code: 1ua3(A).
		2. Ligand: EDO × 1 1,2-Ethanediol PDB code: 1wo2(A).
		3. Ligand: NPO × 1 P-Nitrophenol PDB code: 1vah(A).
		4. Ligand: GLC-GLC-GLC-GLC-GLC-GLC × 3 GLC=Alpha-D-Glucose. PDB codes: 3l2l(A), 3l2m(A),
		5. Ligand: AC1-GLC-AC1-BGC × 1 AC1=6-Methyl-5-(4,5,6-Trihydroxy-3-Hydroxymethyl-Cyclohex- 2-Enylamino)-Tetrahydro-Pyran-2,3,4-Triol, GLC=Alpha-D-Glucose, BGC=Beta-D-Glucose. PDB code: 1ose(A).
		6. Ligand: AGL-GLC-HMC-AGL-GLC-BGC × 1 AGL=4,6-Dideoxy-4-Amino-Alpha-D-Glucose, GLC=Alpha-D-Glucose, HMC=5-Hydroxymethyl-Chonduritol, BGC=Beta-D-Glucose. PDB code: 1pig(A).
		7. Ligand: GLC-AC1-AC1-GLC-BGC × 1 GLC=Alpha-D-Glucose, AC1=6-Methyl-5-(4,5,6-Trihydroxy-3-Hydroxymethyl-Cyclohex- 2-Enylamino)-Tetrahydro-Pyran-2,3,4-Triol, BGC=Beta-D-Glucose. PDB code: 1hx0(A).
		8. Ligand: GLC-GLC-BGC × 1 GLC=Alpha-D-Glucose, BGC=Beta-D-Glucose. PDB code: 1wo2(A).
		9. Ligand: GLC-GLC-DAF-BGC × 1 GLC=Alpha-D-Glucose, DAF=1,4-Deoxy-4-((5-Hydroxymethyl-2,3,4-Trihydroxycyclohex- 5-Enyl)amino)fructose, BGC=Beta-D-Glucose. PDB code: 1ppi(A).
		10. Ligand: GLC-GLC-GLC-GLC × 1 GLC=Alpha-D-Glucose. PDB code: 3l2l(A).
		11. Ligand: GLC-MA1 × 1 GLC=Alpha-D-Glucose, MA1=1,4-Dithio-Alpha-D-Glucopyranose. PDB code: 1jfh(A).
		12. Ligand: GOL × 1 Glycerol PDB code: 4x0n(A).
		13. Ligand: MA2-MA3 × 1 MA2=4-S-Methyl-4-Thio-Alpha-D-Glucopyranose, MA3=O1-Methyl-4-Deoxy-4-Thio-Alpha-D-Glucose. PDB code: 1jfh(A).

Cluster 2 contains 6 ligand types

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Ligand		Description
		1. Ligand: MAL × 1 Maltose PDB code: 1hx0(A).
		2. Ligand: MLR × 1 Maltotriose PDB code: 1ua3(A).
		3. Ligand: EDO × 1 1,2-Ethanediol PDB code: 1hx0(A).
		4. Ligand: BGC × 1 Beta-D-Glucose PDB code: 1ose(A).
		5. Ligand: BGC-GLC × 1 GLC=Alpha-D-Glucose, BGC=Beta-D-Glucose. PDB code: 1pig(A).
		6. Ligand: GLC-GLC-BGC × 1 GLC=Alpha-D-Glucose, BGC=Beta-D-Glucose. PDB code: 1wo2(A).

Cluster 3 contains 5 ligand types

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Ligand		Description
		1. Ligand: MAL × 1 Maltose PDB code: 1ua3(A).
		2. Ligand: EDO × 2 1,2-Ethanediol PDB codes: 1hx0(A),
		3. Ligand: GLC-BGC × 1 GLC=Alpha-D-Glucose, BGC=Beta-D-Glucose. PDB code: 1wo2(A).
		4. Ligand: GLC-GLC × 1 GLC=Alpha-D-Glucose. PDB code: 1pig(A).
		5. Ligand: GLC-MA1 × 1 GLC=Alpha-D-Glucose, MA1=1,4-Dithio-Alpha-D-Glucopyranose. PDB code: 1jfh(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: EDO-EDO × 1 EDO=1,2-Ethanediol. PDB code: 1ua3(A).
		2. Ligand: GLC-GLC-GLC-GLC-GLC-GLC × 1 GLC=Alpha-D-Glucose. PDB code: 3l2m(A).

Cluster 5 contains 3 ligand types

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Ligand		Description
_Cl		1. Metal: _CL × 2 PDB codes: 1hx0(A), 1ua3(A).
		2. Ligand: BGC × 1 Beta-D-Glucose PDB code: 1ua3(A).
		3. Ligand: GLC × 1 Alpha-D-Glucose PDB code: 3l2l(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: BGC × 1 Beta-D-Glucose PDB code: 1pig(A).