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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P00425
Ligand clusters for P00425: Cytochrome c oxidase subunit 5B, mitochondrial from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
4 ligand clusters
Cluster 1.
3 ligand types
6 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Representative protein: 6t15e
Structures
PDB
Schematic diagram
6t15
e
6t0b
e
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
PCF × 2
colfosceril palmitate
1,2-Diacyl-Sn-Glycero-3-Phoshocholine
PDB codes:
6t0b
(e),
6t15
(e).
2. Ligand:
CDL × 2
Cardiolipin
PDB codes:
6t0b
(e),
6t15
(e).
3. Ligand:
PEF × 2
Di-Palmitoyl-3-Sn-Phosphatidylethanolamine
PDB codes:
6t0b
(e),
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
PCF × 2
colfosceril palmitate
1,2-Diacyl-Sn-Glycero-3-Phoshocholine
PDB codes:
6t0b
(e),
6t15
(e).
2. Ligand:
PEF × 2
Di-Palmitoyl-3-Sn-Phosphatidylethanolamine
PDB codes:
6t0b
(e),
6t15
(e).
Cluster 3 contains 1 ligand type
Selection shortcuts:
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Ligand
Description
1. Ligand:
PEF × 2
Di-Palmitoyl-3-Sn-Phosphatidylethanolamine
PDB codes:
6t0b
(e),
6t15
(e).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
PEF × 1
Di-Palmitoyl-3-Sn-Phosphatidylethanolamine
PDB code:
6t15
(e).