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Ligand clusters for UniProt code P00383

Ligand clusters for P00383: Dihydrofolate reductase type 2 OS=Escherichia coli OX=562 PE=1 SV=1

6 ligand clusters
Cluster 1.
5 ligand types
6 ligands
Cluster 2.
2 ligand types
7 ligands
Cluster 3.
1 ligand type
10 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1vifA  
JSmol
 

Structures

PDB   Schematic diagram
1vifA    
2rk1A    
6nxzA    
2rk2A    
3sfmA    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: NAP × 1
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB code: 2p4t(A).


 
2. Ligand: FOL × 1
folic acid
Folic acid
PDB code: 1vif(A).


 
3. Ligand: NAP × 2
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB codes: 2rk1(A), 2rk2(A).


 
4. Ligand: D49 × 1
2-[4-[(2~{r})-4-[4-(6-Carboxy-1~{h}-Benzimidazol-2-Yl) phenoxy]-2-Oxidanyl-Butoxy]phenyl]-1~{h}-
Benzimidazole-5-Carboxylic acid
PDB code: 6nxz(A).


 
5. Ligand: LBA × 1
2-(4-{3-[4-(6-Carboxy-1h-Benzimidazol-2-Yl)phenoxy]-2- Hydroxypropoxy}phenyl)-1h-Benzimidazole-5-
Carboxylic acid
PDB code: 6ny0(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: MRD × 6
(4r)-2-Methylpentane-2,4-Diol
PDB codes: 2rh2(A), 2rk1(A), 2rk2(A), 3sfm(A), 6nxz(A).


 
2. Ligand: PO4 × 1
Phosphate ion
PDB code: 6ny0(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: MRD × 10
(4r)-2-Methylpentane-2,4-Diol
PDB codes: 2rh2(A), 2rk1(A), 2rk2(A), 3sfm(A), 6nxz(A), 6ny0(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: MRD × 1
(4r)-2-Methylpentane-2,4-Diol
PDB code: 6ny0(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 6nxz(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 6ny0(A).

 

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