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Ligand clusters for UniProt code O87605

Ligand clusters for O87605: Cytochrome P450 monooxygenase PikC OS=Streptomyces venezuelae OX=54571 GN=pikC PE=1 SV=1

Top 6 (of 19) ligand clusters
Cluster 1.
9 ligand types
29 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
2 ligand types
3 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 2c7xA  
JSmol
 

Structures

PDB   Schematic diagram
2c7xA    
3zk5A    
2bvjA    
4bf4A    
3zpiA    
 more ...

 

 Cluster 1 contains 9 ligand types

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 4b7d(A), 4b7s(A).


 
2. Ligand: HEM × 15
Protoporphyrin IX containing fe
PDB codes: 2bvj(A), 2c6h(A), 2c7x(A), 2ca0(A), 2cd8(A), 2vz7(A), 2vzm(A), 2whw(A), 2wi9(A), 3zk5(A), 3zpi(A), 4b7d(A), 4b7s(A), 4bf4(A), 4umz(A).


 
3. Ligand: PXI × 4
4-{[4-(Dimethylamino)-3-Hydroxy-6- Methyltetrahydro-2h-Pyran-2-Yl]oxy}-12-Ethyl-3,5,7,11-
Tetramethyloxacyclododec-9-Ene-2,8-Dione
PDB codes: 2c6h(A), 2ca0(A), 2cd8(A), 2vz7(A).


 
4. Ligand: NRB × 2
Narbomycin
PDB codes: 2c7x(A), 2vzm(A).


 
5. Ligand: QLE × 2
[(3r,4s,5s,7r,9e,11r,12r)-12-Ethyl-3,5,7,11- Tetramethyl-2,8-Bis(oxidanylidene)-1-Oxacyclododec-9-
En-4-Yl] 3-(Dimethylamino)propanoate
PDB codes: 4b7d(A), 4b7s(A).


 
6. Ligand: 1D2 × 1
Desosaminyl cyclododecane
PDB code: 2wi9(A).


 
7. Ligand: 1D4 × 1
Cyclotridecyl 3,4,6-Trideoxy-3- (Dimethylamino)-Beta-D-Xylo-Hexopyranoside
PDB code: 2whw(A).


 
8. Ligand: XJO × 1
(3r,4s,5s,7r,9e,11r,12r)-12-Ethyl-3,5,7,11- Tetramethyl-2,8-Dioxooxacyclododec-9-En-4-Yl 2-
[(Dimethylamino)methyl]benzoate
PDB code: 4umz(A).


 
9. Ligand: Z18 × 1
(3r,4s,5s,7r,9e,11r,12r)-12-Ethyl-3,5,7,11- Tetramethyl-2,8-Dioxooxacyclododec-9-En-4-Yl n, N-
Dimethylglycinate
PDB code: 3zk5(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3zpi(A).


 
2. Ligand: TLA × 1
L(+)-Tartaric acid
PDB code: 3zpi(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4b7s(A).


 
2. Ligand: SO4 × 2
Sulfate ion
PDB codes: 2c6h(A), 4bf4(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4b7s(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 2c6h(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: EDO × 2
1,2-Ethanediol
PDB codes: 3zpi(A),


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 4b7s(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: DTT × 1
2,3-Dihydroxy-1,4-Dithiobutane
PDB code: 2bvj(A).

 

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