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Ligand clusters for UniProt code O76242

Ligand clusters for O76242: Neural hemoglobin OS=Cerebratulus lacteus PE=1 SV=3

Top 6 (of 8) ligand clusters
Cluster 1.
4 ligand types
27 ligands
Cluster 2.
3 ligand types
10 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 1kr7A  
JSmol
 

Structures

PDB   Schematic diagram
1kr7A    
4aveA    
2xkiA    
4avdA    
1v07A    
 more ...

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: SO4 × 10
Sulfate ion
PDB codes: 1kr7(A), 1v07(A), 2vyy(A), 2vyz(A), 2xkg(A), 2xkh(A), 2xki(A), 4avd(A), 4ave(A), 4f6b(A).


 
2. Ligand: HEM-OXY × 9
HEM=Protoporphyrin IX containing fe, OXY=Oxygen molecule.
PDB codes: 1kr7(A), 1v07(A), 2vyy(A), 2vyz(A), 2xkg(A), 2xkh(A), 4f68(A), 4f6d(A), 4f6i(A).


 
3. Ligand: HEM × 5
Protoporphyrin IX containing fe
PDB codes: 2xki(A), 4ave(A), 4f69(A), 4f6b(A), 4f6g(A).


 
4. Ligand: HEM-CMO × 3
HEM=Protoporphyrin IX containing fe, CMO=Carbon monoxide.
PDB codes: 4avd(A), 4f6f(A), 4f6j(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: ACT × 4
acetic acid
Acetate ion
PDB codes: 1kr7(A), 2vyz(A), 4avd(A), 4ave(A).


 
2. Ligand: GOL × 4
Glycerol
PDB codes: 2xki(A), 4f69(A), 4f6b(A), 4f6g(A).


 
3. Ligand: SO4 × 2
Sulfate ion
PDB codes: 2vyy(A), 2xkg(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
Glycerol
PDB codes: 2vyy(A), 2vyz(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
Glycerol
PDB codes: 2vyy(A), 2vyz(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
Glycerol
PDB codes: 4avd(A), 4ave(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 3
Sulfate ion
PDB codes: 2xkg(A), 4avd(A), 4ave(A).

 

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