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Ligand clusters for UniProt code O75340
Ligand clusters for O75340: Programmed cell death protein 6 OS=Homo sapiens GN=PDCD6 PE=1 SV=1
Top 6 (of 9) ligand clusters
Cluster 1.
2 ligand types
4 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
4 ligand types
10 ligands
Representative protein: 5gqqC
Structures
PDB
Schematic diagram
5gqq
C
2znd
A
2zrs
A
2zne
A
2zn8
A
more ...
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
MRD × 3
(4r)-2-Methylpentane-2,4-Diol
PDB codes:
2znd
(A),
2. Ligand:
2PE × 1
Nonaethylene glycol
PDB code:
2zn9
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
12P × 1
Dodecaethylene glycol
PDB code:
2zn9
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
MRD × 1
(4r)-2-Methylpentane-2,4-Diol
PDB code:
2znd
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
MRD × 1
(4r)-2-Methylpentane-2,4-Diol
PDB code:
2znd
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
PO4 × 1
Phosphate ion
PDB code:
2znd
(A).
Cluster 6 contains 4 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 4
PDB codes:
2zn8
(A),
2zne
(A),
3aak
(A),
3wxa
(A).
_Ca
2. Metal:
_CA × 4
PDB codes:
2zn9
(A),
2zrs
(A),
3aaj
(A),
5gqq
(C).
_Cl
3. Metal:
_CL × 1
PDB code:
5gqq
(C).
_Na
4. Metal:
_NA × 1
PDB code:
2znd
(A).