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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code O75084
Ligand clusters for O75084: Frizzled-7 from Homo sapiens
Top 6 (of 16) ligand clusters
Cluster 1.
5 ligand types
9 ligands
Cluster 2.
2 ligand types
6 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
3 ligand types
5 ligands
Representative protein: 5urvB
Structures
PDB
Schematic diagram
5urv
B
6o3b
C
6ne2
A
6ne4
A
5urv
A
more ...
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
SO4 × 3
Sulfate ion
PDB codes:
5urv
(B),
6ne4
(A).
2. Ligand:
ACT × 2
Acetate ion
PDB codes:
6ne2
(A),
3. Ligand:
NER × 2
(15e)-Tetracos-15-Enoic acid
PDB codes:
5urv
(A),
4. Ligand:
CXS × 1
3-Cyclohexyl-1-Propylsulfonic acid
PDB code:
6o3a
(E).
5. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6ne4
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAG × 5
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
5urv
(A),
6ne2
(A),
6o3a
(E),
6o3b
(C).
2. Ligand:
1PG × 1
2-(2-{2-[2-(2-Methoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)- Ethanol
PDB code:
5urv
(B).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
6ne2
(A),
6ne4
(A).
2. Ligand:
1PG × 1
2-(2-{2-[2-(2-Methoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)- Ethanol
PDB code:
5urv
(B).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
1PG × 1
2-(2-{2-[2-(2-Methoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)- Ethanol
PDB code:
5urv
(B).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
6ne4
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
1PG × 1
2-(2-{2-[2-(2-Methoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)- Ethanol
PDB code:
5urv
(A).
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6ne2
(A).
Cluster 6 contains 3 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
6o3b
(C).
2. Ligand:
SO4 × 3
Sulfate ion
PDB codes:
5urv
(A),
6ne4
(A).
3. Ligand:
ACT × 1
Acetate ion
PDB code:
6ne2
(A).