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EBI
Databases
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PDBsum
Ligand clusters for UniProt code O59257
Ligand clusters for O59257: 173aa long hypothetical ferripyochelin binding protein OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH1591 PE=1 SV=1
Top 6 (of 9) ligand clusters
Cluster 1.
2 ligand types
4 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
2 ligands
Representative protein: 1v3wA
Structures
PDB
Schematic diagram
1v3w
A
1v67
A
2fko
A
Cluster 1 contains 2 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 3
PDB codes:
1v3w
(A),
1v67
(A),
2fko
(A).
2. Ligand:
GOL × 1
Glycerol
PDB code:
1v3w
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
1v3w
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
1v3w
(A),
2fko
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
1v3w
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
2fko
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Ca
1. Metal:
_CA × 2
PDB codes:
1v3w
(A),
1v67
(A).