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Ligand clusters for UniProt code O06543

Ligand clusters for O06543: Alpha-methylacyl-CoA racemase from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)

6 ligand clusters
Cluster 1.
8 ligand types
8 ligands
Cluster 2.
7 ligand types
12 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
2 ligands
Representative protein: 2yimA  
JSmol
 

Structures

PDB   Schematic diagram
2yimA    
1x74A    
2gd6A    
2gceA    
2gd2A    
 more ...

 

 Cluster 1 contains 8 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1x74(A).


 
2. Ligand: ACO × 1
Acetyl coenzyme A
PDB code: 2gd6(A).


 
3. Ligand: CAA × 1
Acetoacetyl-Coenzyme a
PDB code: 2gd2(A).


 
4. Ligand: RFC × 1
(R)-Ibuprofenoyl-Coenzyme a
PDB code: 2gce(A).


 
5. Ligand: SFC × 1
(S)-Ibuprofenoyl-Coenzyme a
PDB code: 2gce(A).


 
6. Ligand: MRR × 1
(R)-2-Methylmyristoyl-Coenzyme a
PDB code: 2gci(A).


 
7. Ligand: MRS × 1
(S)-2-Methylmyristoyl-Coenzyme a
PDB code: 2gd0(A).


 
8. Ligand: MC4 × 1
2-Methylacetoacetyl CoA
PDB code: 2yim(A).

 

 Cluster 2 contains 7 ligand types

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Ligand Description


 
1. Ligand: GOL × 6
glycerin
Glycerol
PDB codes: 1x74(A), 2gci(A), 2gd0(A), 2gd2(A).


 
2. Ligand: CAA × 1
Acetoacetyl-Coenzyme a
PDB code: 2gd2(A).


 
3. Ligand: RFC × 1
(R)-Ibuprofenoyl-Coenzyme a
PDB code: 2gce(A).


 
4. Ligand: SFC × 1
(S)-Ibuprofenoyl-Coenzyme a
PDB code: 2gce(A).


 
5. Ligand: MRR × 1
(R)-2-Methylmyristoyl-Coenzyme a
PDB code: 2gci(A).


 
6. Ligand: MRS × 1
(S)-2-Methylmyristoyl-Coenzyme a
PDB code: 2gd0(A).


 
7. Ligand: MC4 × 1
2-Methylacetoacetyl CoA
PDB code: 2yim(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1x74(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2gd6(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2yim(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 2
Phosphate ion
PDB codes: 1x74(A), 2yim(A).

 

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