Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code K7N5L2
Ligand clusters for K7N5L2: Hemagglutinin OS=Influenza A virus PE=1 SV=1
Top 6 (of 11) ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
3 ligand types
8 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
2 ligand types
8 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 2yp2A
Structures
PDB
Schematic diagram
2yp2
A
2yp4
A
2yp5
A
2yp3
A
Cluster 1 contains 3 ligand types
Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
SIA-GAL × 1
GAL
=Beta-D-Galactose,
SIA
=O-Sialic acid.
PDB code:
2yp5
(A).
2. Ligand:
SIA-GAL-NAG × 1
NAG
=N-Acetyl-D-Glucosamine,
SIA
=O-Sialic acid,
GAL
=Beta-D-Galactose.
PDB code:
2yp3
(A).
3. Ligand:
SIA-GAL-NAG-GAL-BGC × 1
NAG
=N-Acetyl-D-Glucosamine,
SIA
=O-Sialic acid,
GAL
=Beta-D-Galactose,
BGC
=Beta-D-Glucose.
PDB code:
2yp4
(A).
Cluster 2 contains 3 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
NAG × 2
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB codes:
2yp4
(A),
2. Ligand:
NAG-NAG × 3
NAG
=N-Acetyl-D-Glucosamine.
PDB codes:
2yp2
(A),
2yp3
(A),
2yp5
(A).
3. Ligand:
NAG-NAG-MAN × 3
MAN
=Alpha-D-Mannose,
NAG
=N-Acetyl-D-Glucosamine.
PDB codes:
2yp2
(A),
2yp3
(A),
2yp5
(A).
Cluster 3 contains 2 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
NAG × 3
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB codes:
2yp3
(A),
2yp4
(A),
2yp5
(A).
2. Ligand:
NAG-NAG-MAN × 1
MAN
=Alpha-D-Mannose,
NAG
=N-Acetyl-D-Glucosamine.
PDB code:
2yp2
(A).
Cluster 4 contains 2 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
NAG × 4
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB codes:
2yp2
(A),
2yp3
(A),
2yp4
(A),
2yp5
(A).
2. Ligand:
EPE × 4
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB codes:
2yp2
(A),
2yp3
(A),
2yp4
(A),
2yp5
(A).
Cluster 5 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
EPE × 2
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB codes:
2yp2
(A),
2yp5
(A).
Cluster 6 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
EPE × 3
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB codes:
2yp2
(A),
2yp3
(A),
2yp4
(A).