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Ligand clusters for UniProt code K7N5L2

Ligand clusters for K7N5L2: Hemagglutinin OS=Influenza A virus PE=1 SV=1

Top 6 (of 11) ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
3 ligand types
8 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
2 ligand types
8 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 2yp2A  
JSmol
 

Structures

PDB   Schematic diagram
2yp2A    
2yp4A    
2yp5A    
2yp3A    

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: SIA-GAL × 1
GAL=Beta-D-Galactose, SIA=O-Sialic acid.
PDB code: 2yp5(A).


 
2. Ligand: SIA-GAL-NAG × 1
NAG=N-Acetyl-D-Glucosamine, SIA=O-Sialic acid, GAL=Beta-D-Galactose.
PDB code: 2yp3(A).


 
3. Ligand: SIA-GAL-NAG-GAL-BGC × 1
NAG=N-Acetyl-D-Glucosamine, SIA=O-Sialic acid, GAL=Beta-D-Galactose, BGC=Beta-D-Glucose.
PDB code: 2yp4(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: NAG × 2
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB codes: 2yp4(A),


 
2. Ligand: NAG-NAG × 3
NAG=N-Acetyl-D-Glucosamine.
PDB codes: 2yp2(A), 2yp3(A), 2yp5(A).


 
3. Ligand: NAG-NAG-MAN × 3
MAN=Alpha-D-Mannose, NAG=N-Acetyl-D-Glucosamine.
PDB codes: 2yp2(A), 2yp3(A), 2yp5(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 3
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB codes: 2yp3(A), 2yp4(A), 2yp5(A).


 
2. Ligand: NAG-NAG-MAN × 1
MAN=Alpha-D-Mannose, NAG=N-Acetyl-D-Glucosamine.
PDB code: 2yp2(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 4
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB codes: 2yp2(A), 2yp3(A), 2yp4(A), 2yp5(A).


 
2. Ligand: EPE × 4
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB codes: 2yp2(A), 2yp3(A), 2yp4(A), 2yp5(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EPE × 2
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB codes: 2yp2(A), 2yp5(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EPE × 3
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB codes: 2yp2(A), 2yp3(A), 2yp4(A).

 

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