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Ligand clusters for UniProt code J3F2B0

Ligand clusters for J3F2B0: HNH endonuclease domain protein OS=Actinomyces naeslundii str. Howell 279 GN=HMPREF1129_2620 PE=4 SV=1

Top 6 (of 7) ligand clusters
Cluster 1.
1 ligand type
2 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
2 ligand types
3 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 4ogeA  
JSmol
 

Structures

PDB   Schematic diagram
4ogeA    
4ogcA    

 

 Cluster 1 contains 1 ligand type

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Ligand Description


 
1. Ligand: SPD × 2
Spermidine
PDB codes: 4ogc(A), 4oge(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: SPD × 1
Spermidine
PDB code: 4oge(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: ACT × 1
acetic acid
Acetate ion
PDB code: 4ogc(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description

_Mn
 
1. Metal: _MN × 2
PDB codes: 4ogc(A),

_Mg
 
2. Metal: _MG × 1
PDB code: 4oge(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 2
PDB codes: 4ogc(A), 4oge(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Mg
 
1. Metal: _MG × 2
PDB codes: 4ogc(A), 4oge(A).

 

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