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Ligand clusters for UniProt code J3F2B0
Ligand clusters for J3F2B0: HNH endonuclease domain protein OS=Actinomyces naeslundii str. Howell 279 GN=HMPREF1129_2620 PE=4 SV=1
Top 6 (of 7) ligand clusters
Cluster 1.
1 ligand type
2 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
2 ligand types
3 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 4ogeA
Structures
PDB
Schematic diagram
4oge
A
4ogc
A
Cluster 1 contains 1 ligand type
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Ligand
Description
1. Ligand:
SPD × 2
Spermidine
PDB codes:
4ogc
(A),
4oge
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
SPD × 1
Spermidine
PDB code:
4oge
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACT × 1
acetic acid
Acetate ion
PDB code:
4ogc
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
_Mn
1. Metal:
_MN × 2
PDB codes:
4ogc
(A),
_Mg
2. Metal:
_MG × 1
PDB code:
4oge
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 2
PDB codes:
4ogc
(A),
4oge
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Mg
1. Metal:
_MG × 2
PDB codes:
4ogc
(A),
4oge
(A).