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Ligand clusters for UniProt code H0USY5

Ligand clusters for H0USY5: Inorganic pyrophosphatase OS=Thermococcus thioreducens OX=277988 GN=ppa PE=1 SV=1

6 ligand clusters
Cluster 1.
4 ligand types
9 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3i98A  
JSmol
 

Structures

PDB   Schematic diagram
3i98A    
3r5uA    
3r6eA    
3r5vA    
5ucqA    

 

 Cluster 1 contains 4 ligand types

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Ligand Description

_Mn
 
1. Metal: _MN × 1
PDB code: 3r5u(A).

_Ca
 
2. Metal: _CA × 5
PDB codes: 3i98(A), 3r5v(A), 5ucq(A),


 
3. Ligand: SO4 × 2
Sulfate ion
PDB codes: 3r6e(A),


 
4. Ligand: POP × 1
Pyrophosphate 2-
PDB code: 5ucq(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: MRD × 2
(4r)-2-Methylpentane-2,4-Diol
PDB codes: 3i98(A), 5ucq(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5ucq(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5ucq(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5ucq(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5ucq(A).

 

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