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Ligand clusters for UniProt code G8JZS4

Ligand clusters for G8JZS4: Glucan 1,4-alpha-glucosidase SusB from Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)

Top 6 (of 7) ligand clusters
Cluster 1.
5 ligand types
9 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 2d73A  
JSmol
 

Structures

PDB   Schematic diagram
2d73A    
3wfaA    
2jkaA    
2jkpA    
2jkeA    

 

 Cluster 1 contains 5 ligand types

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Ligand Description

_Ca
 
1. Metal: _CA × 4
PDB codes: 2d73(A), 2jka(A), 2jke(A), 2jkp(A).


 
2. Ligand: EDO × 2
1,2-Ethanediol
PDB codes: 2jka(A),


 
3. Ligand: CTS × 1
Castanospermine
PDB code: 2jkp(A).


 
4. Ligand: NOJ × 1
1-Deoxynojirimycin
PDB code: 2jke(A).

_Na
 
5. Metal: _NA × 1
PDB code: 3wfa(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDT × 1
edetic acid
{[-(Bis-Carboxymethyl-Amino)-Ethyl]-Carboxymethyl- Amino}-Acetic acid
PDB code: 3wfa(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDT × 1
edetic acid
{[-(Bis-Carboxymethyl-Amino)-Ethyl]-Carboxymethyl- Amino}-Acetic acid
PDB code: 3wfa(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 3
1,2-Ethanediol
PDB codes: 2jka(A), 2jke(A), 2jkp(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 3
1,2-Ethanediol
PDB codes: 2jka(A), 2jke(A), 2jkp(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 2jke(A).

 

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