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Ligand clusters for UniProt code G8IPF0
Ligand clusters for G8IPF0: Hemagglutinin OS=Influenza A virus (A/duck/Egypt/10185SS/2010(H5N1)) GN=HA PE=3 SV=1
4 ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
3 ligands
Representative protein: 5e2yA
Structures
PDB
Schematic diagram
5e2y
A
5e2z
C
5e30
C
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
SIA-GAL × 1
SIA
=O-Sialic acid,
GAL
=Beta-D-Galactose.
PDB code:
5e2z
(C).
2. Ligand:
SIA-GAL-NAG-GAL × 1
NAG
=N-Acetyl-D-Glucosamine,
SIA
=O-Sialic acid,
GAL
=Beta-D-Galactose.
PDB code:
5e30
(C).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAG-FUL-NAG × 2
NAG
=N-Acetyl-D-Glucosamine,
FUL
=Beta-L-Fucose.
PDB codes:
5e2y
(A),
5e2z
(C).
2. Ligand:
NAG-FUC-FUL-NAG × 1
NAG
=N-Acetyl-D-Glucosamine,
FUC
=Alpha-L-Fucose,
FUL
=Beta-L-Fucose.
PDB code:
5e30
(C).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG-FUL-NAG × 2
NAG
=N-Acetyl-D-Glucosamine,
FUL
=Beta-L-Fucose.
PDB codes:
5e2y
(A),
5e2z
(C).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG × 3
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB codes:
5e2y
(A),
5e2z
(C),
5e30
(C).