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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code F6IQS1
Ligand clusters for F6IQS1: MHC class I antigen (Fragment) from Homo sapiens
Top 6 (of 12) ligand clusters
Cluster 1.
3 ligand types
6 ligands
Cluster 2.
3 ligand types
4 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
2 ligands
Representative protein: 6tdqA
Structures
PDB
Schematic diagram
6tdq
A
6tds
A
6tdr
A
6tdo
A
6tdp
A
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
EDO × 3
1,2-Ethanediol
PDB codes:
6tdr
(A),
6tds
(A),
2. Ligand:
GLY-MET × 2
PDB codes:
6tdo
(A),
6tdq
(A).
3. Ligand:
GLY-LEU × 1
PDB code:
6tdp
(A).
Cluster 2 contains 3 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
6tdo
(A),
6tdp
(A).
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6tdr
(A).
3. Ligand:
GLY-MET × 1
PDB code:
6tdq
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO-EDO × 1
EDO
=1,2-Ethanediol.
PDB code:
6tds
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
6tdo
(A),
6tdp
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6tdq
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
6tdq
(A),
6tdr
(A).