spacer
spacer

Ligand clusters for UniProt code E8MF13

Ligand clusters for E8MF13: 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) GN=lnpA PE=1 SV=1

Top 6 (of 8) ligand clusters
Cluster 1.
4 ligand types
7 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
3 ligand types
7 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 2zuuA  
JSmol
 

Structures

PDB   Schematic diagram
2zuuA    
3wfzA    
2zuwA    
2zutA    
2zuvA    

 

 Cluster 1 contains 4 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: NDG × 4
2-(Acetylamino)-2-Deoxy-A-D-Glucopyranose
PDB codes: 2zuu(A), 2zuv(A), 2zuw(A), 3wfz(A).


 
2. Ligand: A2G × 1
N-Acetyl-2-Deoxy-2-Amino-Galactose
PDB code: 2zut(A).


 
3. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 2zuv(A).


 
4. Ligand: NO3 × 1
Nitrate ion
PDB code: 2zuv(A).

 

 Cluster 2 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: A2G × 1
N-Acetyl-2-Deoxy-2-Amino-Galactose
PDB code: 2zut(A).


 
2. Ligand: NDG × 1
2-(Acetylamino)-2-Deoxy-A-D-Glucopyranose
PDB code: 2zuw(A).

 

 Cluster 3 contains 3 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: GOL × 3
Glycerol
PDB codes: 2zut(A), 2zuu(A), 2zuw(A).


 
2. Ligand: NO3 × 3
Nitrate ion
PDB codes: 2zut(A), 2zuv(A), 2zuw(A).


 
3. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 2zuv(A).

 

 Cluster 4 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 2zuv(A).


 
2. Ligand: NO3 × 1
Nitrate ion
PDB code: 2zuv(A).

 

 Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: GOL × 1
Glycerol
PDB code: 2zut(A).

 

 Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: GOL × 1
Glycerol
PDB code: 2zut(A).

 

spacer

spacer