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Ligand clusters for UniProt code D9IEF7

Ligand clusters for D9IEF7: Endolysin from Enterobacteria phage T4

Top 6 (of 11) ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
2 ligand types
8 ligands
Cluster 3.
2 ligand types
7 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6ajfA  
JSmol
 

Structures

PDB   Schematic diagram
6ajfA    
6ajgA    
6ajhA    
6ajjA    

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: 3RX × 1
N-[(2e)-3,7-Dimethylocta-2,6-Dien-1-Yl]-N'-[(1r,3s,5r, 7r)-Tricyclo[3.3.1.1~3,7~]dec-2-Yl]ethane-
1,2-Diamine
PDB code: 6ajg(A).


 
2. Ligand: 9ZF × 1
1-(2-Adamantyl)-3-[2,3,4-Tris(fluoranyl)phenyl]urea
PDB code: 6ajh(A).


 
3. Ligand: J9E × 1
4,6-Difluoro-N-(Spiro[5.5]undecan-3-Yl)-1h-Indole-2- Carboxamide
PDB code: 6ajj(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: L6T × 6
Alpha-D-Glucopyranosyl 6-O-Dodecyl-Alpha-D- Glucopyranoside
PDB codes: 6ajf(A), 6ajh(A), 6ajj(A),


 
2. Ligand: LMT × 2
Dodecyl-Beta-D-Maltoside
PDB codes: 6ajg(A),

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: L6T × 4
Alpha-D-Glucopyranosyl 6-O-Dodecyl-Alpha-D- Glucopyranoside
PDB codes: 6ajf(A), 6ajh(A), 6ajj(A),


 
2. Ligand: LMT × 3
Dodecyl-Beta-D-Maltoside
PDB codes: 6ajg(A),

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: L6T × 1
Alpha-D-Glucopyranosyl 6-O-Dodecyl-Alpha-D- Glucopyranoside
PDB code: 6ajh(A).


 
2. Ligand: MHA × 1
(Carbamoylmethyl-Carboxymethyl-Amino)-Acetic acid
PDB code: 6ajh(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: L6T × 3
Alpha-D-Glucopyranosyl 6-O-Dodecyl-Alpha-D- Glucopyranoside
PDB codes: 6ajf(A), 6ajh(A), 6ajj(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: LMT × 1
Dodecyl-Beta-D-Maltoside
PDB code: 6ajg(A).

 

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