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EBI Databases Structure Databases PDBsum

Ligand clusters for UniProt code D3KVM3

Ligand clusters for D3KVM3: Glycerol kinase OS=Trypanosoma brucei gambiense OX=31285 GN=gk PE=1 SV=1

1 ligand cluster
Cluster 1.
8 ligand types
22 ligands
Representative protein: 3wxjA  
JSmol
 

Structures

PDB   Schematic diagram
3wxjA    
5gn6A    
3wxkA    
5gn5A    
6j9vA    
 more ...

 

 Cluster 1 contains 8 ligand types

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Ligand Description


 
1. Ligand: GOL × 13
glycerin
Glycerol
PDB codes: 3wxj(A), 3wxk(A), 3wxl(A), 5azi(A), 5azj(A), 5gn5(A), 5gn6(A), 6j9q(A), 6j9v(A), 6j9x(A), 6jae(A), 6jaf(A).


 
2. Ligand: 4NP × 2
4-Nitrophenyl phosphate
PDB codes: 5azi(A), 5azj(A).


 
3. Ligand: ADP × 2
Adenosine-5'-Diphosphate
PDB codes: 3wxl(A), 6j9v(A).


 
4. Ligand: 6XZ × 1
4-[[4-(4-Methoxyphenyl)piperazin-1-Yl]methyl]-7,8- Bis(oxidanyl)chromen-2-One
PDB code: 5gn5(A).


 
5. Ligand: 6Y0 × 1
4-Butyl-7,8-Bis(oxidanyl)chromen-2-One
PDB code: 5gn6(A).


 
6. Ligand: ANP × 1
Phosphoaminophosphonic acid-Adenylate ester
PDB code: 6j9q(A).


 
7. Ligand: PO4 × 1
Phosphate ion
PDB code: 6jae(A).


 
8. Ligand: POP × 1
Pyrophosphate 2-
PDB code: 6jaf(A).

 

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