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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code B7TVP1
Ligand clusters for B7TVP1: Glutaconyl-CoA decarboxylase subunit A OS=Clostridium symbiosum GN=gcdA PE=1 SV=1
4 ligand clusters
Cluster 1.
2 ligand types
3 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
2 ligands
Representative protein: 3gf3A
Structures
PDB
Schematic diagram
3gf3
A
3glm
A
3gf7
A
3gma
A
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
COO × 2
Crotonyl coenzyme a
PDB codes:
3gf3
(A),
3glm
(A).
2. Ligand:
GRA × 1
Glutaryl-Coenzyme a
PDB code:
3gma
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
COO × 1
Crotonyl coenzyme a
PDB code:
3glm
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
3gf7
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
_Cl
1. Metal:
_CL × 2
PDB codes:
3gf3
(A),
3glm
(A).