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Ligand clusters for UniProt code A8GFD6

Ligand clusters for A8GFD6: Glycoside hydrolase family 18 OS=Serratia proteamaculans (strain 568) OX=399741 GN=Spro_2725 PE=1 SV=1

4 ligand clusters
Cluster 1.
6 ligand types
16 ligands
Cluster 2.
1 ligand type
4 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Representative protein: 4lgxA  
JSmol
 

Structures

PDB   Schematic diagram
4lgxA    
4ptmA    
4q22A    
4nzcA    
6f8nA    
 more ...

 

 Cluster 1 contains 6 ligand types

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Ligand Description


 
1. Ligand: GOL × 4
glycerin
Glycerol
PDB codes: 4lgx(A), 4nzc(A), 4ptm(A), 4q22(A).


 
2. Ligand: NAG × 2
n-acetylglucosamine
N-Acetyl-D-Glucosamine
PDB codes: 4ptm(A), 4q22(A).


 
3. Ligand: ACT × 4
Acetate ion
PDB codes: 4lgx(A), 4nzc(A), 4ptm(A), 4q22(A).


 
4. Ligand: EDO × 4
1,2-Ethanediol
PDB codes: 6f8n(A), 6hm1(A),


 
5. Ligand: AO3 × 1
Allosamidin
PDB code: 6hm1(A).


 
6. Ligand: NAG-NAG × 1
NAG=N-Acetyl-D-Glucosamine.
PDB code: 6f8n(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 4
glycerin
Glycerol
PDB codes: 4lgx(A), 4nzc(A), 4ptm(A), 4q22(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4nzc(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6f8n(A).

 

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