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Ligand clusters for UniProt code A0A4V8GZK8

Ligand clusters for A0A4V8GZK8: Catechol 2,3-dioxygenase, extradiol protein from Diaphorobacter sp. DS2

6 ligand clusters
Cluster 1.
3 ligand types
4 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
2 ligands
Representative protein: 5znhA  
JSmol
 

Structures

PDB   Schematic diagram
5znhA    
5zsxA    

 

 Cluster 1 contains 3 ligand types

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Ligand Description

_Fe
 
1. Metal: _FE × 2
PDB codes: 5znh(A), 5zsx(A).


 
2. Ligand: 3FA × 1
3-Fluorobenzene-1,2-Diol
PDB code: 5zsx(A).


 
3. Ligand: MCT × 1
4-Methylcatechol
PDB code: 5znh(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: PEG × 2
Di(hydroxyethyl)ether
PDB codes: 5znh(A), 5zsx(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5znh(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5zsx(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5zsx(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Ca
 
1. Metal: _CA × 2
PDB codes: 5znh(A), 5zsx(A).

 

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