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Ligand clusters for UniProt code A0A0S2UQQ5

Ligand clusters for A0A0S2UQQ5: Reducing-end xylose-releasing exo-oligoxylanase Rex8A from Paenibacillus barcinonensis

Top 6 (of 11) ligand clusters
Cluster 1.
6 ligand types
12 ligands
Cluster 2.
2 ligand types
5 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6trhA  
JSmol
 

Structures

PDB   Schematic diagram
6trhA    
6shyA    
6towA    
6sudA    
6srdA    
 more ...

 

 Cluster 1 contains 6 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 6srd(A).


 
2. Ligand: EDO × 5
1,2-Ethanediol
PDB codes: 6shy(A), 6tpp(A),


 
3. Ligand: XYP × 3
Beta-D-Xylopyranose
PDB codes: 6srd(A), 6sud(A),


 
4. Ligand: XYP-XYP-XYP-AHR × 1
XYP=Beta-D-Xylopyranose, AHR=Alpha-L-Arabinofuranose.
PDB code: 6to0(A).


 
5. Ligand: XYP-XYP-XYP-AHR-XYP × 1
XYP=Beta-D-Xylopyranose, AHR=Alpha-L-Arabinofuranose.
PDB code: 6trh(A).


 
6. Ligand: XYP-XYP-XYP-XYP × 1
XYP=Beta-D-Xylopyranose.
PDB code: 6tow(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 3
glycerin
Glycerol
PDB codes: 6srd(A), 6sud(A), 6to0(A).


 
2. Ligand: EDO × 2
1,2-Ethanediol
PDB codes: 6shy(A),

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6shy(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6shy(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6shy(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6shy(A).

 

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