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PDBsum entry 3abk
Go to PDB code:
Ligand/metal interactions
PDB id
3abk
6 instances of ligand highlighted
PEK
Ligands
HEA
×3
HEA 515(A)
HEA 516(A)
_NO
NO 520(A)
PGV
×8
PGV 524(A)
PGV 521(A)
PGV 267(C)
PGV 268(C)
CUA
×2
CUA 228(B)
TGL
×6
TGL 521(B)
TGL 523(D)
TGL 522(L)
PSC
×2
PSC 229(B)
CHD
×8
CHD 1085(B)
CHD 525(C)
CHD 271(C)
CHD 60(J)
UNX
×2
UNX 262(C)
PEK
×6
PEK 264(C)
PEK 265(C)
PEK 1263(G)
CDL
×4
CDL 270(C)
CDL 269(G)
DMU
DMU 272(C)
HEA-_NO
HEA 516(N) to NO 520(N)
Metals
_ZN
×2
ZN 99(F)
_CU
×2
CU 517(A)
_MG
×2
MG 518(A)
_NA
×2
NA 519(A)
Ligand
PEK
-
(1s)-2-{[(2-Aminoethoxy)(hydroxy)phosphoryl]oxy}-1-
[(Stearoyloxy)methyl]ethyl (5e,8e,11e,14e)-Icosa-
5,8, 11,14-Tetraenoate
[Phosphatidylethanolamine; 2-Arachidonoyl-1-Stearoyl-Sn-
Glycerol-3-Phosphoethanolamine]
Formula:
C
43
H
78
NO
8
P
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
PEK 265(C)
53
53
0
0
0
0
0
1
0
0
Advanced Analysis
Residue
Name Mismatches
Count
PEK 265(C)
O14: O13
|
O13: O14
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand PEK
List of
interactions
PEK 265(C)
(also representing equivalent ligand PEK 1265(T) )
_ZN
×2
_CU
×2
_MG
×2
