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PDBsum entry 5ydh
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Ligand/metal interactions
PDB id
5ydh
3 instances of ligand highlighted
GOL
Ligands
NAG-NAG-BMA-MAN
NAG 1(C) to MAN 4(C)
NAG-NAG-BMA-MAN-
MAN
NAG 1(D) to MAN 5(D)
SO4
×26
SO4 801(A)
SO4 802(A)
SO4 803(A)
SO4 804(A)
SO4 805(A)
SO4 807(A)
SO4 808(A)
SO4 809(A)
SO4 810(A)
SO4 804(B)
SO4 809(B)
SO4 810(B)
SO4 811(B)
SO4 812(B)
SO4 814(B)
SO4 816(B)
NAG
×2
NAG 811(A)
EPE
×3
EPE 812(A)
EPE 813(A)
GOL
×3
GOL 814(A)
GOL 815(A)
Metals
_CO
×2
CO 816(A)
Ligand
GOL
-
Glycerol
[Glycerin; propane-1,2,3-Triol]
Formula:
C
3
H
83
O
3
Validation of ligand annotation
Additional Information
Validation carried out using
MotiveValidator
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Validator
DB
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Residues with less than 7 heavy atoms are not validated.
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LIGPLOT
of interactions involving ligand GOL
List of
interactions
GOL 815(A)
_CO
×2
