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PDBsum entry 2fcp
Go to PDB code:
Ligand/metal interactions
PDB id
2fcp
Ligand highlighted
EA2
Ligands
GP1-GP4-KDO-GMH-
GPH-GLC-GLA-GLA-
KDO
GP1 1(B) to KDO 9(B)
LIL
×2
LIL 803(A)
LIL 804(A)
AAE
AAE 805(A)
LIM
LIM 806(A)
EA2
EA2 807(A)
Metals
_NI
×2
NI 801(A)
NI 802(A)
Ligand
EA2
-
Aminoethanolpyrophosphate
Formula:
C
2
H
9
NO
7
P
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GP1 1(B)
16
16
0
0
Complete
Chiral checks - OK
GP4 2(B)
16
16
1
0
Complete
Chiral checks - OK
KDO 3(B)
16
16
1
0
Complete
Chiral checks - OK
GMH 4(B)
14
14
1
0
Complete
Chiral checks - OK
GPH 5(B)
18
18
1
0
Complete
Chiral checks - OK
GLC 6(B)
12
12
1
0
Complete
Chiral checks - OK
GLA 7(B)
12
12
1
0
Complete
Chiral checks - OK
GLA 8(B)
12
12
1
0
Complete
Chiral checks - OK
KDO 9(B)
16
16
1
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
GP1 1(B)
O8B: O7B
|
O7B: O8B
2
GP4 2(B)
O8A: O7A
|
O7A: O8A
2
KDO 3(B)
-
0
GMH 4(B)
-
0
GPH 5(B)
-
0
GLC 6(B)
-
0
GLA 7(B)
-
0
GLA 8(B)
-
0
KDO 9(B)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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of interactions involving ligand EA2
List of
interactions
EA2 807(A)
_NI
×2
