Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
PDBsum entry 6pxh
Go to PDB code:
Ligand/metal interactions
PDB id
6pxh
Ligand highlighted
NAG-NAG-BMA-MAN-
MAN
Ligands
NAG-NAG-BMA
×4
NAG 1(E) to BMA 3(E)
NAG 1(F) to BMA 3(F)
NAG 1(G) to BMA 3(G)
NAG-NAG
×4
NAG 1(I) to NAG 2(I)
NAG 1(K) to NAG 2(K)
NAG-NAG-BMA-MAN-
MAN-MAN-MAN-MAN
NAG 1(J) to MAN 8(J)
NAG-NAG-BMA-MAN-
MAN
NAG 1(O) to MAN 5(O)
NAG
×5
NAG 410(A)
NAG 423(A)
NAG 401(B)
SO4
×10
SO4 424(A)
SO4 425(A)
SO4 426(A)
SO4 427(A)
SO4 418(B)
SO4 301(C)
SO4 302(C)
DHF
×2
DHF 428(A)
Ligand
NAG-NAG-BMA-MAN-MAN
NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose [N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
BMA
-
Beta-D-Mannopyranose [Beta-D-Mannose; d-Mannose; mannose]
Formula:
C
6
H
12
O
6
MAN
-
Alpha-D-Mannopyranose [Alpha-D-Mannose; d-Mannose; mannose]
Formula:
C
6
H
12
O
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(O)
15
15
1
1
Complete
Chiral checks - OK
NAG 2(O)
15
15
1
0
Complete
Chiral checks - OK
BMA 3(O)
12
12
1
0
Complete
Chiral checks - OK
MAN 4(O)
12
12
1
0
Complete
Chiral checks - OK
MAN 5(O)
12
12
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
Use mouse to move/zoom
3D Viewers:
LIGPLOT
of interactions involving ligand NAG-NAG-BMA-MAN-MAN
List of
interactions
NAG 1(O) to MAN 5(O)
