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PDBsum entry 6dpf
Go to PDB code:
Ligand/metal interactions
PDB id
6dpf
Ligand highlighted
PGE
Ligands
_DC-_DG
DC 5(b) to DG 6(b)
GOL
×3
GOL 209(A)
GOL 210(A)
GOL 212(A)
EDO
×4
EDO 211(A)
EDO 213(A)
EDO 214(A)
EDO 215(A)
PGE
PGE 216(A)
Metals
__K
K 217(A)
IOD
×5
IOD 102(b)
IOD 205(A)
IOD 206(A)
IOD 207(A)
IOD 208(A)
_MN
×5
MN 201(A)
MN 202(A)
MN 203(A)
MN 204(A)
MN 101(b)
Ligand
PGE
-
Triethylene glycol
Formula:
C
6
H
14
O
4
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
PGE 216(A)
10
10
0
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand PGE
List of
interactions
PGE 216(A)
__K
IOD
×5
_MN
×5
