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PDBsum entry 5ift
Go to PDB code:
Ligand/metal interactions
PDB id
5ift
Ligand highlighted
GLC-GAL
Ligands
NAG-NAG-BMA-MAN-
MAN
NAG 1(B) to MAN 5(B)
NAG-NAG-BMA-MAN-
MAN-MAN-MAN-MAN
NAG 1(C) to MAN 8(C)
NAG-NAG-BMA-MAN-
MAN-MAN
NAG 1(D) to MAN 6(D)
GLC-GAL
GLC 1(E) to GAL 2(E)
NAG
×6
NAG 1156(A)
NAG 1478(A)
NAG 1522(A)
NAG 1739(A)
NAG 1760(A)
NAG 1777(A)
SO4
SO4 2001(A)
DMS
×3
DMS 3004(A)
DMS 3005(A)
DMS 3007(A)
Metals
_CL
CL 2003(A)
Ligand
GLC-GAL
GLC
-
Alpha-D-Glucopyranose [Alpha-D-Glucose; d-Glucose; glucose]
Formula:
C
6
H
12
O
6
GAL
-
Beta-D-Galactopyranose [Beta-D-Galactose; d-Galactose; galactose]
Formula:
C
6
H
12
O
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLC 1(E)
12
12
0
0
Complete
Chiral checks - OK
GAL 2(E)
12
12
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand GLC-GAL
List of
interactions
GLC 1(E) to GAL 2(E)
_CL
