PDBsum entry 5ej1

Ligand/metal interactions

PDB id

5ej1


	2 instances of ligand highlighted
	C2E

Ligands

UNK-UNK-UNK-UNK

UNK 170(D) to UNK 173(D)

UNK-UNK-UNK

UNK 175(D) to UNK 177(D)

BGC-BGC-BGC-BGC-
BGC-BGC-BGC-BGC-
BGC-BGC-BGC-BGC-
BGC-BGC-BGC-BGC-
BGC-BGC

BGC 1(C) to BGC 18(C)

C2E ×2

C2E 919(A)

XP5 ×2

3PE ×2

Ligand C2E - 9,9'-[(2r,3r,3as,5s,7ar,9r,10r,10as,12s,14ar)-3,5,10, 12-
Tetrahydroxy-5,12-Dioxidooctahydro-2h,7h-Difuro[3, 2-
D:3',2'-J][1,3,7,9,2, 8]tetraoxadiphosphacyclododecine-2,9-
Diyl]bis(2-Amino- 1,9-Dihydro-6h-Purin-6-One)
[C-Di-Gmp; cyclic diguanosine monophosphate]
Formula: C₂₀H₂₄N₁₀O₁₄P₂

Validation of ligand annotation

Per Residue Validation

	Atoms				Missing		Incorrect Chiral Centres
Residue	Dic.	Struc.	Link	Subs.	Atoms	Rings	Planar	High	C	Other
C2E 919(A)	46	46	0	0	Complete		Chiral checks - OK

Additional Information

Validation carried out using MotiveValidator. Full validation report can be found in Validator^DB.

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LIGPLOT of interactions involving ligand C2E

List of
interactions

C2E 919(A)