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PDBsum entry 3mym
Go to PDB code:
Ligand/metal interactions
PDB id
3mym
Ligand highlighted
HEM-CYN
Ligands
HEM
HEM 139(A)
CYN
CYN 188(A)
SO4
×3
SO4 195(A)
SO4 196(A)
SO4 197(B)
HEM-CYN
HEM 139(B) to CYN 189(B)
Ligand
HEM-CYN
HEM
-
Protoporphyrin IX containing fe [Heme]
Formula:
C
34
H
32
FeN
4
O
4
CYN
-
Cyanide ion
Formula:
CN
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
HEM 139(B)
43
43
0
0
Complete
Chiral checks - OK
CYN 189(B)
2
-
-
-
Residue too small to validate
Advanced Analysis
Residue
Name Mismatches
Count
HEM 139(B)
O2D: O1D
|
O1D: O2D
2
CYN 189(B)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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of interactions involving ligand HEM-CYN
List of
interactions
HEM 139(B) to CYN 189(B)
