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PDBsum entry 2dvc
Go to PDB code:
Ligand/metal interactions
PDB id
2dvc
Ligand highlighted
GLC-FRU
Ligands
NAG-NAG-BMA-MAN-
MAN
NAG 1(B) to MAN 5(B)
NAG-NAG
NAG 1(C) to NAG 2(C)
NAG-NAG-BMA-BMA-
MAN-BMA
NAG 1(D) to BMA 6(D)
GLC-FRU
GLC 1(E) to FRU 2(E)
CO3
CO3 1003(A)
SO4
SO4 1006(A)
Metals
_FE
FE 1002(A)
_ZN
×2
ZN 1004(A)
ZN 1005(A)
Ligand
GLC-FRU
GLC
-
Alpha-D-Glucopyranose [Alpha-D-Glucose; d-Glucose; glucose]
Formula:
C
6
H
12
O
6
FRU
-
Beta-D-Fructofuranose [Beta-D-Fructose; d-Fructose; fructose]
Formula:
C
6
H
12
O
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLC 1(E)
12
12
1
0
Complete
Chiral checks - OK
FRU 2(E)
12
12
0
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand GLC-FRU
List of
interactions
GLC 1(E) to FRU 2(E)
_FE
_ZN
×2
