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PDBsum entry 6r3v
Go to PDB code:
Ligand/metal interactions
PDB id
6r3v
Ligand highlighted
GDP
Ligands
PO4
×2
PO4 301(A)
PO4 204(B)
MES
MES 201(B)
GDP
GDP 202(B)
DTT
DTT 205(B)
Metals
_MG
MG 203(B)
Ligand
GDP
-
Guanosine-5'-Diphosphate
Formula:
C
10
H
15
N
5
O
11
P
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GDP 202(B)
28
28
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
GDP 202(B)
O3B: O1B
|
O1B: O3B
|
O2A: O1A
|
O1A: O2A
4
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand corresponds to this enzyme's product GDP
LIGPLOT
of interactions involving ligand GDP
List of
interactions
GDP 202(B)
_MG
