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PDBsum entry 6c6c
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Ligand/metal interactions PDB id
6c6c
Ligand highlighted
EMG
Ligands
NAG-NAG-BMA-MAN-
MAN-FUC
NAG 1(C) to FUC 6(C)
NAG ×2
NAG 301(A)
NAG 302(A)
EMG
EMG 303(A)
Metals
_NA ×2
NA 304(A)
NA 101(B)
  
Ligand EMG - N-[(2s,3s,4r)-3,4-Dihydroxy-8-Oxo-8-[(6-
Phenylhexyl) amino]-1-{[(2s,3r,4s,5r,6r)-3,4,5-Trihydroxy-
6- (Hydroxymethyl)tetrahydro-2h-Pyran-2-Yl]oxy}octan-2-
Yl]icosanamide
[Agsa[20,6p]]
Formula: C46H82N2O10
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
NAG 1(C) 15 15 1 1 Complete Chiral checks - OK
NAG 2(C) 15 15 1 0 Complete Chiral checks - OK
BMA 3(C) 12 12 1 0 Complete Chiral checks - OK
MAN 4(C) 12 12 1 0 Complete Chiral checks - OK
MAN 5(C) 12 12 1 0 Complete Chiral checks - OK
FUC 6(C) 11 11 1 0 Complete Chiral checks - OK
Additional Information
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List of
interactions
 

EMG 303(A)
  
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