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PDBsum entry 5tc3
Go to PDB code:
Ligand/metal interactions
PDB id
5tc3
4 instances of ligand highlighted
GDP
Ligands
5GP
×2
5GP 600(A)
ATP
×2
ATP 601(A)
GDP
×4
GDP 602(A)
GDP 603(A)
ACT
ACT 604(A)
Ligand
GDP
-
Guanosine-5'-Diphosphate
Formula:
C
10
H
15
N
5
O
11
P
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GDP 602(A)
28
28
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
GDP 602(A)
O3B: O1B
|
O1B: O2B
|
O2A: O1A
|
O1A: O2A
4
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand GDP
List of
interactions
GDP 602(A)
(also representing equivalent ligand GDP 602(B) )
