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PDBsum entry 5m32
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Ligand/metal interactions PDB id
5m32
2 instances of ligand highlighted
6V9-7C9-7C9-6VA
Ligands
GLN-VAL-ILE-GLU-
TYR
GLN 260(r) to TYR 264(r)
MET-ILE-VAL
MET 270(r) to VAL 272(r)
6V9-7C9-7C9-6VA ×2
6V9 1(t) to 6VA 4(t)
ADP ×6
ADP 501(c)
ADP 501(d)
ADP 501(e)
ADP 501(g)
ADP 502(g)
ADP 401(h)
  
Ligand 6V9-7C9-7C9-6VA

6V9 - 2-Methyl-1,3-Thiazole-5-Carboxylic acid Formula: C5H5NO2S
7C9 - O-Methyl-L-Serine Formula: C4H9NO3
6VA - (3~{r},4~{s})-4-Azanyl-2-Methyl-5-Phenyl-Pentane-2,3- Diol Formula: C12H9NO2
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
6V9 1(t) 9 9 1 1 Complete Chiral checks - OK
7C9 2(t) 8 8 1 1 Complete Chiral checks - OK
7C9 3(t) 8 8 1 1 Complete Chiral checks - OK
6VA 4(t) 15 15 0 0 Complete Chiral checks - OK
Advanced Analysis
Residue Name Mismatches Count
6V9 1(t) - 0
7C9 2(t) - 0
7C9 3(t) - 0
6VA 4(t) C20: C16|C19: C17|C17: C19|C16: C20 4
Additional Information
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LIGPLOT of interactions involving ligand 6V9-7C9-7C9-6VA

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List of
interactions
 

6V9 1(t) to 6VA 4(t)

(also representing equivalent ligand 6V9 1(u) to 6VA 4(u) )
  
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