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PDBsum entry 5a0c
Go to PDB code:
Ligand/metal interactions
PDB id
5a0c
2 instances of ligand highlighted
JJV
Ligands
NAG-NAG-FUC
×2
NAG 1(C) to FUC 3(C)
NAG-FUC
×2
NAG 1(D) to FUC 2(D)
JJV
×2
JJV 1001(A)
MES
×2
MES 1002(A)
XPE
XPE 1003(A)
Ligand
JJV
-
(6s)-6-(4-Cyano-2-Methylsulfonyl-Phenyl)-4-Methyl-2-
Oxidanylidene-3-[3-(Trifluoromethyl)phenyl]-1,6-
Dihydropyrimidine-5-Carbonitrile
Formula:
C
21
H
15
F
3
N
4
O
3
S
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
JJV 1001(A)
32
32
0
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand JJV
List of
interactions
JJV 1001(A)
(also representing equivalent ligand JJV 1001(B) )
