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PDBsum entry 4z0y
Go to PDB code:
Ligand/metal interactions
PDB id
4z0y
Ligand highlighted
GLY-VAL-PHE-THR-
THR-PRO-CYS-ASP-
PRO-GLU
Ligands
VAL-PHE-THR-THR-
PRO-CYS-ASP-PRO
VAL 440(E) to PRO 447(E)
VAL-PHE-THR-THR-
PRO-CYS-ASP-PRO-
GLU-TYR
VAL 440(G) to TYR 449(G)
GLY-VAL-PHE-THR-
THR-PRO-CYS-ASP-
PRO-GLU
GLY 439(H) to GLU 448(H)
GOL
×5
GOL 603(A)
GOL 603(B)
GOL 603(C)
GOL 603(D)
GOL 604(D)
Metals
_CU
×8
CU 601(A)
CU 602(A)
Ligand
GLY-VAL-PHE-THR-THR-PRO-CYS-ASP-PRO-GLU
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLY 439(H)
5
-
-
-
-
-
-
-
-
-
VAL 440(H)
8
8
1
1
0
0
0
0
0
0
PHE 441(H)
12
12
1
1
0
0
0
0
0
0
THR 442(H)
8
8
1
1
0
0
0
0
0
0
THR 443(H)
8
8
1
1
0
0
0
0
0
0
PRO 444(H)
8
8
1
1
0
0
0
0
0
0
CYS 445(H)
7
7
1
1
0
0
0
0
0
0
ASP 446(H)
9
9
1
1
0
0
0
0
0
0
PRO 447(H)
8
8
1
1
0
0
0
0
0
0
GLU 448(H)
10
5
0
0
5
0
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
GLY 439(H)
-
0
VAL 440(H)
O: OXT
1
PHE 441(H)
O: OXT
1
THR 442(H)
-
0
THR 443(H)
-
0
PRO 444(H)
-
0
CYS 445(H)
O: OXT
1
ASP 446(H)
OD2: OD1
|
OD1: OD2
|
O: OXT
3
PRO 447(H)
-
0
GLU 448(H)
O: OXT
1
Additional Information
Validation carried out using
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of interactions involving ligand GLY-VAL-PHE-THR-THR-PRO-CYS-ASP-PRO-GLU
List of
interactions
GLY 439(H) to GLU 448(H)
_CU
×8
