PDBsum entry 3w1v

Ligand/metal interactions

PDB id

3w1v


	2 instances of ligand highlighted
	UDZ

Ligands

SO4 ×14

EPE

UDZ ×2

UDZ 409(A)

Metals

_NA

NA 408(B)

Ligand UDZ - [(2r,3s,4r,5r,6r)-5-Acetamido-6-[[[(2r,3s,4r,5r)-5-[2, 4-
Bis(oxidanylidene)pyrimidin-1-Yl]-3,4-Bis(oxidanyl) oxolan-
2-Yl]methoxy-Oxidanyl-Phosphoryl]oxy-Oxidanyl-
Phosphoryl]oxy-3,4-Bis(oxidanyl)oxan-2-Yl]methylimino-
Azanylidene-Azanium
Formula: C₁₇H₂₇N₆OPP₂

Validation of ligand annotation

Per Residue Validation

	Atoms				Missing		Incorrect Chiral Centres
Residue	Dic.	Struc.	Link	Subs.	Atoms	Rings	Planar	High	C	Other
UDZ 409(A)	41	41	0	0	Complete		Chiral checks - OK

Additional Information

Validation carried out using MotiveValidator. Full validation report can be found in Validator^DB.

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Ligand matches this enzyme's reactant UDP-alpha-D-glucose with similarity 79.07%

LIGPLOT of interactions involving ligand UDZ

List of
interactions

UDZ 409(A)

(also representing equivalent ligand UDZ 409(B) )