Sequence alignment between 6id1(I) and UniProt seq
Q9HCS7 (SYF1_HUMAN):
Q9HCS7 (SYF1_HUMAN):
Pre-mRNA-splicing factor SYF1 from Homo sapiens
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850
---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+-----
UniProt: MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPLRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFGSLKED
......................................................................................................................................................................XXXXX............XX................XXX..............XXXX.............................................................................XXX..............XXX...............................................XX..................................................XXXX.................XXXXX.......................................................XXXXXXX.....................................................XXXXXXXXX....................................................................XXX..............XXXXXXXXX..............XX...........XXXXXXXXXXXXXXXX.............................XXXXX.................XXX................XXX.............................................................................
PDB seq: -----------------------------------------------------------------------------------------------------------------------------------------------------------LRSHPLPETAV-----FLKLSPESAEEY--YLKSSDRLDEAAQRLA---NDERFVSKAGKSNY----ELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSY---EESMIAAKMETASE---EEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVAL--GRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVIL----KVNFKQVDDLASVWCQC-----RHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGT-------YDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWST---------GGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYI---AEIYGVTHTRGIYQ---------HAREMCLRFADMEC--GEIDRARAIYS----------------TWKDFEVRHGNEDTIKEMLRIRRSVQATY-----FMASQMLKVSGSATGTV---APGQSGMDDMKLLEQR---LAAEAERDQPLRAQSKILFVRSDASREELAELAQQVNPEEI------------------------------------
----+------ --------+--- ----+---------+- -----+-------- -------+---------+---------+---------+---------+---------+---------+--------- -------+------ +---------+---------+---------+---------+------ -+---------+---------+---------+---------+-------- -------+--------- -----+---------+---------+---------+---------+--------- ---+---------+---------+---------+---------+--------- -+---------+---------+---------+---------+---------+---------+------ +---------+--- -------+------ -+--------- ----+---------+---------+---- +---------+------ +---------+----- -+---------+---------+---------+---------
160 180 190 200 210 230 240 250 260 270 280 290 310 320 330 340 350 360 370 380 390 400 410 430 450 460 470 480 490 510 520 530 540 550 570 580 590 600 610 620 630 640 650 670 680 710 720 730 740 750 760 770 780 790 800 810