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PDBsum entry 3vdb
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Ligand/metal interactions
PDB id
3vdb
77 instances of ligand highlighted
DMS
Ligands
149
×4
149 2001(A)
DMS
×77
DMS 8001(A)
DMS 8002(A)
DMS 8003(A)
DMS 8004(A)
DMS 8005(A)
DMS 8006(A)
DMS 8007(A)
DMS 8008(A)
DMS 8009(A)
DMS 8010(A)
DMS 8011(A)
DMS 8012(A)
DMS 8013(A)
DMS 8014(A)
DMS 8015(A)
DMS 8016(A)
DMS 8017(A)
DMS 8018(A)
DMS 8006(B)
DMS 8013(B)
DMS 8014(B)
DMS 8015(B)
DMS 8019(B)
DMS 8021(B)
DMS 8022(B)
DMS 8007(C)
DMS 8013(C)
DMS 8015(C)
DMS 8018(C)
DMS 8019(C)
DMS 8020(C)
DMS 8012(D)
DMS 8015(D)
Metals
_MG
×9
MG 3001(A)
MG 3002(A)
MG 3007(B)
_NA
×14
NA 3101(A)
NA 3102(A)
NA 3103(A)
NA 3104(B)
NA 3104(D)
Ligand
DMS
-
Dimethyl sulfoxide
Formula:
C
2
H
6
OS
Validation of ligand annotation
Additional Information
Validation carried out using
MotiveValidator
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Validator
DB
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Residues with less than 7 heavy atoms are not validated.
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of interactions involving ligand DMS
List of
interactions
DMS 8007(A)
also representing 4 other equivalent ligands:
DMS 8008(B)
DMS 8020(B)
DMS 8009(C)
DMS 8008(D)
_MG
×9
_NA
×14
