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PDBsum entry 2vt4
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Ligand/metal interactions
PDB id
2vt4
12 instances of ligand highlighted
SOG
Ligands
P32
×4
P32 400(A)
SOG
×12
SOG 402(A)
SOG 403(A)
SOG 405(A)
SOG 404(B)
D10
×2
D10 406(A)
Metals
_NA
×4
NA 401(A)
Ligand
SOG
-
Octyl 1-Thio-Beta-D-Glucopyranoside
[2-Hydroxymethyl-6-Octylsulfanyl-Tetrahydro-Pyran-3,4,5-
Triol; 1-S-Octyl-Beta-D-Thioglucoside; octyl 1-Thio-
Beta-D-Glucoside; octyl 1-Thio-D-Glucoside; octyl 1-
Thio-Glucoside]
Formula:
C
14
H
28
O
5
S
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
SOG 405(A)
20
20
0
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand SOG
List of
interactions
SOG 405(A)
also representing 3 other equivalent ligands:
SOG 405(B)
SOG 405(C)
SOG 405(D)
_NA
×4
