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PDBsum entry 6zym
Go to PDB code:
Ligand/metal interactions
PDB id
6zym
Ligand highlighted
GTP
Ligands
IHP
IHP 3001(A)
GTP
GTP 1001(B)
Metals
_MG
×5
MG 105(6)
MG 101(6)
MG 102(6)
MG 103(6)
MG 104(6)
_ZN
×7
ZN 303(P)
ZN 203(Q)
ZN 1001(u)
ZN 301(P)
ZN 302(P)
ZN 201(Q)
ZN 202(Q)
Ligand
GTP
-
Guanosine-5'-Triphosphate
Formula:
C
10
H
16
N
5
O
14
P
3
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GTP 1001(B)
32
32
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
GTP 1001(B)
O3G: O1G
|
O1G: O2G
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand matches this enzyme's reactant ATP with similarity 96.88%
LIGPLOT
of interactions involving ligand GTP
List of
interactions
GTP 1001(B)
_MG
×5
_ZN
×7
