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PDBsum entry 6pmd
Go to PDB code:
Ligand/metal interactions
PDB id
6pmd
14 instances of ligand highlighted
MPD
Ligands
SHV-WFP-SER-PRO-
YCP-ALA-MP8
×11
SHV 1(H) to MP8 7(H)
SHV 1(R) to MP8 7(R)
MPD
×14
MPD 400(A)
Ligand
MPD
-
(4s)-2-Methyl-2,4-Pentanediol
Formula:
C
6
H
14
O
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
MPD 400(A)
8
8
0
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand MPD
List of
interactions
MPD 400(A)
also representing 13 other equivalent ligands:
MPD 400(B)
MPD 400(C)
MPD 400(D)
MPD 400(E)
MPD 400(F)
MPD 400(G)
MPD 400(I)
MPD 400(K)
MPD 400(L)
MPD 400(M)
MPD 400(N)
MPD 400(S)
MPD 400(T)
