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PDBsum entry 6fbw
Go to PDB code:
Ligand/metal interactions
PDB id
6fbw
Ligand highlighted
THR-PRO-SEP-LEU-
PRO-GLY
Ligands
ARG-THR-PRO-SEP-
LEU-PRO-GLY
ARG 2(B) to GLY 8(B)
THR-PRO-SEP-LEU-
PRO-GLY
THR 3(D) to GLY 8(D)
D4K
×2
D4K 101(B)
Metals
_NA
×4
NA 305(A)
NA 302(A)
NA 303(A)
NA 304(A)
_CL
×2
CL 301(C)
Ligand
THR-PRO-SEP-LEU-PRO-GLY
-
Phosphoserine
[Phosphonoserine]
Formula:
C
3
H
8
NO
6
P
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
THR 3(D)
8
8
1
1
Complete
Chiral checks - OK
PRO 4(D)
8
8
1
1
Complete
Chiral checks - OK
SEP 5(D)
11
11
1
1
Complete
Chiral checks - OK
LEU 6(D)
9
9
1
1
Complete
Chiral checks - OK
PRO 7(D)
8
8
1
1
Complete
Chiral checks - OK
GLY 8(D)
5
-
-
-
Residue too small to validate
Advanced Analysis
Residue
Name Mismatches
Count
THR 3(D)
-
0
PRO 4(D)
-
0
SEP 5(D)
O2P: O1P
|
O1P: O3P
2
LEU 6(D)
O: OXT
1
PRO 7(D)
-
0
GLY 8(D)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand THR-PRO-SEP-LEU-PRO-GLY
List of
interactions
THR 3(D) to GLY 8(D)
_NA
×4
