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PDBsum entry 6d5r
Go to PDB code:
Ligand/metal interactions
PDB id
6d5r
4 instances of ligand highlighted
XYP
Ligands
VAL-LYS
VAL 401(A) to LYS 402(A)
XYP
×4
XYP 408(A)
XYP 409(A)
XYP 410(A)
XYP 411(A)
Metals
_ZN
ZN 403(A)
_CA
×4
CA 404(A)
CA 405(A)
CA 406(A)
CA 407(A)
Ligand
XYP
-
Beta-D-Xylopyranose
[Beta-D-Xylose; d-Xylose; xylose]
Formula:
C
5
H
10
O
5
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
XYP 408(A)
10
10
0
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand XYP
List of
interactions
XYP 408(A)
_ZN
_CA
×4
