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PDBsum entry 5yv0
Go to PDB code:
Ligand/metal interactions
PDB id
5yv0
Ligand highlighted
DPO
Ligands
PO4
×2
PO4 903(F)
PO4 904(F)
DPO
DPO 903(A)
TTP
TTP 901(C)
Metals
_MG
×4
MG 901(F)
MG 902(F)
Ligand
DPO
-
Diphosphate
Formula:
O
7
P
2
4
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
DPO 903(A)
9
9
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
DPO 903(A)
P2: P1
|
O7: O1
|
O6: O2
|
O5: O3
|
P1: P2...
8
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand corresponds to this enzyme's product diphosphate
LIGPLOT
of interactions involving ligand DPO
List of
interactions
DPO 903(A)
_MG
×4
