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PDBsum entry 5g0r
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Ligand/metal interactions
PDB id
5g0r
2 instances of ligand highlighted
TP7
Ligands
F43
×2
F43 554(A)
TP7
×2
TP7 557(A)
Metals
_CL
×3
CL 1551(A)
CL 1444(B)
_MG
×18
MG 251(C)
MG 1500(D)
MG 1500(E)
MG 250(F)
MG 551(A)
MG 553(A)
MG 562(A)
MG 563(A)
MG 1500(A)
MG 444(B)
MG 445(B)
MG 444(E)
MG 445(E)
_NA
×3
NA 564(A)
NA 1502(A)
__K
K 1550(A)
Ligand
TP7
-
Coenzyme b
[7-Mercaptoheptanoylthreoninephosphate]
Formula:
C
11
H
22
NO
7
PS
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
TP7 557(A)
21
21
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
TP7 557(A)
O3P: O1P
|
O1P: O2P
|
OXT: O
|
O: OXT
4
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand corresponds to this enzyme's reactant coenzyme B
LIGPLOT
of interactions involving ligand TP7
List of
interactions
TP7 557(A)
(also representing equivalent ligand TP7 556(D) )
_CL
×3
_NA
×3
__K
