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PDBsum entry 5ee4
Go to PDB code:
Ligand/metal interactions
PDB id
5ee4
4 instances of ligand highlighted
HEM-OXY
Ligands
GOL
×2
GOL 401(A)
GOL 203(D)
HEM-OXY
×4
HEM 201(C) to OXY 202(C)
HEM 201(D) to OXY 202(D)
Ligand
HEM-OXY
HEM
-
Protoporphyrin IX containing fe [Heme]
Formula:
C
34
H
32
FeN
4
O
4
OXY
-
Oxygen molecule
Formula:
O
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
HEM 201(C)
43
43
0
0
Complete
Chiral checks - OK
OXY 202(C)
2
-
-
-
Residue too small to validate
Advanced Analysis
Residue
Name Mismatches
Count
HEM 201(C)
O2D: O1D
|
O1D: O2D
2
OXY 202(C)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand HEM-OXY
List of
interactions
HEM 201(C) to OXY 202(C)
(also representing equivalent ligand HEM 201(E) to OXY 202(E) )
