Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
PDBsum entry 4xqo
Go to PDB code:
Ligand/metal interactions
PDB id
4xqo
Ligand highlighted
NAG-GAL-SIA
Ligands
NAG-NAG
×2
NAG 1(G) to NAG 2(G)
NAG-GAL-SIA
NAG 1(H) to SIA 3(H)
GAL-SIA
GAL 1(I) to SIA 2(I)
NAG
×2
NAG 401(A)
NAG 501(C)
Ligand
NAG-GAL-SIA
NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose [N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
GAL
-
Beta-D-Galactopyranose [Beta-D-Galactose; d-Galactose; galactose]
Formula:
C
6
H
12
O
6
SIA
-
N-Acetyl-Alpha-Neuraminic acid [N-Acetylneuraminic acid; sialic acid; alpha-Sialic acid; o-Sialic acid]
Formula:
C
11
H
9
NO
9
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(H)
15
15
0
0
Complete
Chiral checks - OK
GAL 2(H)
12
12
1
0
Complete
Chiral checks - OK
SIA 3(H)
21
21
1
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
NAG 1(H)
-
0
GAL 2(H)
-
0
SIA 3(H)
O1B: O1A
|
O1A: O1B
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
Use mouse to move/zoom
3D Viewers:
LIGPLOT
of interactions involving ligand NAG-GAL-SIA
List of
interactions
NAG 1(H) to SIA 3(H)
