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PDBsum entry 4ee3
Go to PDB code:
Ligand/metal interactions
PDB id
4ee3
3 instances of ligand highlighted
UDH
Ligands
BGC-GAL-NAG-GAL-
NAG
×3
BGC 1(D) to NAG 5(D)
UDH
×3
UDH 406(A)
SO4
×18
SO4 408(A)
SO4 409(A)
SO4 410(A)
SO4 411(A)
SO4 412(A)
SO4 413(A)
SO4 414(A)
SO4 415(A)
SO4 410(B)
SO4 413(B)
SO4 410(C)
GOL
×3
GOL 416(A)
Metals
_MN
×3
MN 407(A)
Ligand
UDH
-
6-Aminohexyl-Uridine-C1,5'-Diphosphate
Formula:
C
15
H
27
N
3
O
12
P
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
UDH 406(A)
32
32
0
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand matches this enzyme's product UDP with similarity 78.12%
LIGPLOT
of interactions involving ligand UDH
List of
interactions
UDH 406(A)
also representing 2 other equivalent ligands:
UDH 406(B)
UDH 406(C)
_MN
×3
